[gmx-users] itp for alamethicin

[chris.neale at utoronto.ca]

> pragya chohan wrote:
>> hi... i have to make an itp file for alamethicin .... already tried  
>>  prodrg2 but no success..... pls suggest a way for making .itp file  
>>  ...... residue already defined in ffgmx.rtp. ...already read   
>> earlier query posted but could not find an ans.
>
> pls rite norml Engspeak in full sentses

Try contacting Peter Tieleman and asking for the topology. He has  
posted many pdbs for alamethicin on his groups website:
http://moose.bio.ucalgary.ca/index.php?page=Structures_and_Topologies

You can find his email address here:
http://moose.bio.ucalgary.ca/index.php?page=Peter_Tieleman

>
> http://wiki.gromacs.org/index.php/Steps_to_Perform_a_Simulation
>
> Mark