[gmx-users] "cannot compute sizeof (int), 77" on AIX 5.3 PPC p575 (searched the list)

liu xin zgxjlx at gmail.com
Sun Nov 11 16:26:54 CET 2007


hi Christian

thx for your reply, I've tried that before with the "--enable-thread" option
of fftw, with no success, after I turned it off , the installation seemed OK
to me.

Yours
Xin

On Nov 9, 2007 1:21 AM, Christian Burisch <burisch at bph.rub.de> wrote:

> Hi,
>
> did you try the solutions given to
> http://www.gromacs.org/pipermail/gmx-users/2006-August/023545.html ?
>
> Regards
>
> Christian
>
>
>
> liu xin schrieb:
>  > Dear GMXers
> > I got the error message " cannot compute sizeof (int)" when I tried to
> > configure GMX3.3.1 on IBM PPC p575 AIX5.3, this is how I did it:
> >
> > for fftw2.1.5
> > export CC="xlc_r -q64 -qhot"
> > export CXX="xlC_r -q64 -qhot"
> > export OBJECT_MODE=64
> > export FFLAGS="-O3 -qarch=pwr4 -qtune=pwr4 -qmaxmem=-1"
> > export CFLAGS="-O3 -qarch=pwr4 -qtune=pwr4 -qmaxmem=-1"
> > ./configure --prefix=/home/usr/programs/fftw215 --enable-float
> --enable-mpi
> > --enable-thread
> > make
> > make install
> >
> > for GMX3.3.1
> >
> > export CPPFLAGS=-I/home/usr/programs/fftw215/include
> > export LDFLAGS=-I/home/usr/programs/fftw215/lib
> > ./configure --prefix=/home/usr/programs/gromacs331mpi --with-fft=fftw2
> > --without-x --disable-fortran --enable-mpi --enable-float
> > then I got the following error:
> > checking size of int... configure: error: cannot compute sizeof (int),
> 77
> >
> > have you guys ever experienced this problem before? Any suggestions are
> > appreciated!
> >
> > Yours
> > Xin
> >
> >
> >
> > ------------------------------------------------------------------------
> >
> > _______________________________________________
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>
> --
> Dr. Christian Burisch
> Protein Mechanics and Evolution Group
> CAS-MPG Partner Institute for Computational Biology
> Shanghai Institutes for Biological Sciences
> 320 Yue Yang Road
> CN-200031 Shanghai
> Tel: +86 21 54920478
> Fax: +86 21 54920451
>  _______________________________________________
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