[gmx-users] G_sas reside area

Mark Abraham Mark.Abraham at anu.edu.au
Sat Nov 17 02:17:35 CET 2007


tangxuan wrote:
> Hi,all
> 
> Is there a fast way to compute the resides area at each time in the
> simulation process? I can get the resides area at some specific time, a
> slow way.For exmple, when I get the average reside area between 0 ps and
> 100ps  and average reside area between 0 ps and 101 ps, i can get the
> reside area at 100st ps by the difference. However, it is hard way to
> get the reside area at each time if the simulation process time is long.
> Could someone give me some suggestions?

Have you tried looking at the output file... area.xvg (unless you used 
the -o option) That and reading g_sas -h will help you do things sensibly.

Mark



More information about the gromacs.org_gmx-users mailing list