[gmx-users] water in lipid bilayer

N-J.M. Macaluso njmm2 at cam.ac.uk
Mon Nov 19 12:52:49 CET 2007


Do you mean constrain the force constants just in the z-direction? Keep in 
mind that the water is already in the gap, so it's now a matter of getting 
it out. Would constraining water in any direction accomplish this?

Thanks,

Max

On Nov 19 2007, himanshu khandelia wrote:

>>  I already constrained the waters in the z-direction
>> at the start of the simulation, so that didn't work in this case.
>
>This happened to me as well. Try increasing the force constants on
>water by an order of magnitude.
>_______________________________________________
>gmx-users mailing list    gmx-users at gromacs.org
>http://www.gromacs.org/mailman/listinfo/gmx-users
>Please search the archive at http://www.gromacs.org/search before posting!
>Please don't post (un)subscribe requests to the list. Use the 
>www interface or send it to gmx-users-request at gromacs.org.
>Can't post? Read http://www.gromacs.org/mailing_lists/users.php
>



More information about the gromacs.org_gmx-users mailing list