[gmx-users] Nucleic Acid Simulations with Gromacs

Anna Reymer anna.reymer at gmail.com
Tue Oct 2 17:15:20 CEST 2007

I would also suggest amber force field ports. I managed to run a
simulation with Amber ff 99
and TIP3P water model in Gromacs.

Good luck,

On 10/2/07, Monika Sharma <mon_sharma at research.iiit.ac.in> wrote:
> Dear All,
> I want to start nucleic acid simulations. I am using gromacs3.3.1. But I
> could not find any mention of Nucleic Acids in any of the force-field
> provided by gromacs distro. So does it mean that one _can not_ simulate
> nucleic acids with gromacs. Has anyone tried? And if someone can guide
> me through??
> Thanks in advance
> Regards,
> Monika
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