[gmx-users] Correcting for box jumps in pdo file

[bmmothan at ucalgary.ca]

Dear all,

I want to know if someone has had the same problem as me. I am running AFM
calculations. when trying to plot the data from the pdo file, I can see
that the coordinates are not fixed for jumps!
The pulled group coordinates sometimes stay the same while the Reference
and spring coordinate jump across the box.
Is there a solution for this?


Thank you

Belquis