[gmx-users] H- bond

[Mark Abraham]

emra Heshmati wrote:
> Dear all
> How do I can visualized side chain - side chain hydrogen bonds in a pdb 
> protein structure? (it's number and energy)

This mailing list is for GROMACS, which is a molecular simulation 
package. You're after a molecular visualization package. Look here for 
suggestions - http://wiki.gromacs.org/index.php/Trajectory_Visualisation

Mark