[gmx-users] make_ndx

sarbani chattopadhyay sarbani_c84 at rediffmail.com
Wed Oct 24 08:50:27 CEST 2007

  Thanks Mark,
                      I could do it following your suggestion.

On Wed, 24 Oct 2007 Mark Abraham wrote :
>sarbani chattopadhyay wrote:
>>   hi,
>>     I want to select two groups in the index file, one group consisting of only the 
>>ring of phenylalanine and the other group consisting of only the alpha carbon.
>>I want to  know the way to use the make_ndx command for this.
>After entering make_ndx, you can use "h<RETURN>" to get some primitive help.
>In this case, you can most quickly solve your problem by hand-editing. See http://
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