[gmx-users] g_rmsf Segmentation fault

David van der Spoel spoel at xray.bmc.uu.se
Wed Oct 31 15:52:58 CET 2007

Tommy Carstensen wrote:
> To the gmx-users,
> When executing:
> g_rmsf -f traj.trr -s topol.tpr -o rmsf.xvg -aniso
> I get the following error after running through all the frames:
> Segmentations fault
> If I don't include the aniso flag I don't get an segfault. Can anyone
> explain to me, why it is not working with the aniso flag?

probably a bug. maybe it works if you input a pdbfile with reference B 
values. Anyway you're welcome to submit a bugzilla, please upload input 
files to reproduce the problem.
> Kind regards,
> Tommy
> Tommy Carstensen
> UCD School of Biomolecular and Biomedical Sciences
> Conway Institute
> University College Dublin
> Dublin 4, Ireland
> http://enzyme.ucd.ie/group_members/tommy
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David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se

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