[gmx-users] perl scripts to convert CHARMM27 files into .tpr

Yang Ye leafyoung at yahoo.com
Tue Sep 18 17:32:32 CEST 2007


There are charmm force field download from gromacs' contribution 
section. You need that.

On 9/18/2007 9:31 PM, Rina Ghosh wrote:
> /
> // Hi Mark,//
> /
> /  form gmx-usesr list one mail draws my attention, where you// inform 
> that you are making available under GPL two perl  //scripts, one of 
> which converts//
> CHARMM27.prm file into //the necessary .itp files for pdb2gmx to use 
> to// produce /
> /.top files, and another that massages that .top file into// something 
> that will produce a .tpr file that will get// CHARMM energy &// force 
> evaluations. /
> /
> I have coordinates for  bilayer using CHARMM27 . I want to /
> /convert this into gromacs structure file. I had tried  //"PRODRG" , 
> but it did not work as my .pdb file contain >2000  //atoms./
> /
> Plz suggest how can I get these perl scripts to make .tpr files.
>
>                          Thanks.
> /
>
> /
> /
>
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