[gmx-users] g_densmap per slice

Berk Hess gmx3 at hotmail.com
Fri Sep 21 11:16:21 CEST 2007




>From: gil claudio <gilclaudio at yahoo.com>
>Reply-To: Discussion list for GROMACS users <gmx-users at gromacs.org>
>To: gmx-users at gromacs.org
>Subject: [gmx-users] g_densmap per slice
>Date: Fri, 21 Sep 2007 01:37:45 -0700 (PDT)
>
>Is there a way to use g_densmap for a slice of the
>box?  For example, g_densmap can average the density
>of a box on the x-y plane, and thus average through
>the z-axis.  If, for example, the z-axis is 10 nm
>deep, can I use g_densmap to get a slice along the
>z-axis, for example, along the slice between 1nm to
>2nm?

Not without editing the code.
But it should not be do difficult to edit the code to make
g_densmap do what you want.

Berk.

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