[gmx-users] reporting failure

luciano.pgomes luciano.pgomes at uol.com.br
Fri Sep 21 13:01:36 CEST 2007


Reporting...


Program mdrun_d, VERSION 3.3.1
Source code file: nsgrid.c, line: 226

Range checking error:
Explanation: During neighborsearching, we assign each particle to a grid
based on its coordinates. If your system contains collisions or parameter
errors that give particles very high velocities you might end up with some
coordinates being +-Infinity or NaN (not-a-number). Obviously, we cannot
put these on a grid, so this is usually where we detect those errors.
Make sure your system is properly energy-minimized and that the potential
energy seems reasonable before trying again.

Variable ci has value -2147483648. It should have been within [ 0 .. 560 ]
Please report this to the mailing list (gmx-users at gromacs.org)

Luciano Gomes





More information about the gromacs.org_gmx-users mailing list