[gmx-users] error in mdrun

Tsjerk Wassenaar tsjerkw at gmail.com
Sat Sep 29 11:51:05 CEST 2007


Hi Mohammad,

Seems this is your problem:

http://www.penguin-soft.com/penguin/man/8/mdrun.html

Not quite the mdrun you meant to be running. Make sure that the
gromacs directory comes first in the path or link/copy it under a
different name.

Best,

Tsjerk

On 9/29/07, Mohammad Ahmadi <mohammad_gromacs at yahoo.com> wrote:
>
> Hi all,
> I installed the gromacs  on my system. The pdb2gmx, editconf,grompp,.. are
> ok,but when I try to do mdrun I have this error:
> mdadm: /dev/md-v not identified in config file.
>
> Any ideas in this relation?
>
> Thanks
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-- 
Tsjerk A. Wassenaar, Ph.D.
Junior UD (post-doc)
Biomolecular NMR, Bijvoet Center
Utrecht University
Padualaan 8
3584 CH Utrecht
The Netherlands
P: +31-30-2539931
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