[gmx-users] GTP in topology

s lal badshah shahbiochemist at yahoo.com
Thu Apr 17 10:44:10 CEST 2008


Hi All,
I have taken the GTP topology from PRODRG server but now how can I make a connection with my original topology file: As in Errors of Gromacs it is mentioned

==> find a topology file for the residue / molecule and include as a .itp file,

what does it means? I am using OPLS/aa force field.
Regards,
Lal badshah.


SYED LAL BADSHAH 
M.Phil Scholar 
NCE in Physical Chemistry, 
University of Peshawar. 
NWFP,Pakistan. 
Cell # 03349060632.
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