[gmx-users] water can't freeze
Vasilii Artyukhov
darth.vasya at gmail.com
Sat Apr 19 19:17:27 CEST 2008
Dear Xiupeng,
What you're seeing is the difference between freezing water and overcooling it.
If you want your water to crystallize, you'll actually have to make it -
e.g., by putting it in contact with ice. Normally, pure water doesn't freeze
on its own, you can easily verify this experimentally at home :)
Best regards,
Vasilii
2008/4/19, Wei, Xiupeng <xiupeng-wei at uiowa.edu>:
>
> Hi gmx users,
> I'm a new Gromacs user. Till now, I can get pretty good
> simulation of ice melting to water, but why can't I simulate water freezing
> to ice?
> The .top and .gro files used for water freezing simulation are
> generated by ice melting to 310K. I changed the temperature in .mdp file to
> 230K, but after mdrun, the water was still water, it can't freeze?
> How can I get water freezing to ice?
> I paste mdp for your reference.
> Thanks.
>
> best,
> xiupeng
>
>
> title = icing at 230 K with cuffoff
> cpp = /lib/cpp
> integrator = md
> ;Time step
> dt = 0.002
> nsteps = 100000
> ;Output control
> nstxout = 100000
> nstvout = 100000
> nstlog = 100
> nstenergy = 100
> nstxtcout = 100
> ;Neigbour searching
> nstlist = 10
> ns_type = grid
> rlist = 0.8
> ;Non bonded interaction
> coulombtype = pme
> optimize_fft = yes
> fourierspacing = 0.2
> pme-order = 6
> ewald-rtol = 1e-05
> rcoulomb = 0.8
> vdw-type = Cut-off
> rvdw = 0.8
> DispCorr = EnerPres
> ;Temperature coupling
> tcoupl = berendsen
> tc-grps = System
> tau_t = 0.1
> ref_t = 230
> ;Pressure coupling
> pcoupl = berendsen
> pcoupltype = isotropic
> tau_p = 1.0
> compressibility = 5e-5
> ref_p = 1.0
>
> gen_temp = 230.0
> constraints = all-bonds
> ; generate velocities
> gen_vel = yes
> gen_seed = 173529
>
>
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