[gmx-users] a question

[David van der Spoel]

shahrbanoo karbalaee wrote:
> dear sir/madam
> 
> I am doing MD ap peptide with gromacs.this peptide( 13 residue) has a 
> NH2 in c terminal.I change it from heteroatom to atom but it take a 
> error.and it say :I acnnot find C alpha for residue 14 NH2 WHILE 
> COMBINING tdb and rtp.what do i do ?
> 
-ter
> best
> 
> 
> -- 
> sh-karbalaee
> 
> 
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-- 
David van der Spoel, Ph.D.
Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone:	+46184714205. Fax: +4618511755.
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se