[gmx-users] the number of water molecules

Mark Abraham Mark.Abraham at anu.edu.au
Sun Apr 20 15:34:10 CEST 2008


Dechang Li wrote:
> Dear all, 
> 
>     How can I calculate the number of water molecules around the 
> protein with a distance about 5 angstrom? Is that possible in 
> Gromacs? 

Probably. Check out the list of tools in section 7.4 of the manual and
then look at the output of the -h flag for tools that look likely.

Mark



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