[gmx-users] A question

Erik Marklund erikm at xray.bmc.uu.se
Thu Apr 24 09:33:34 CEST 2008


I suggest reading the following: 
http://wiki.gromacs.org/index.php/Errors#Residue_.27XXX.27_not_found_in_residue_topology_database

/Erik

samad ahadian skrev:
> Hello,
>
> I am new user of Gromacs. I did a pdb2gmx command on my pdb file. I got an error below:
>
> "Residue 'XXX' not found in residue topology database"
>
> I know that I blindly made my pdb file using Materials Studio 4.2. Let me know there is a special software to make a pdb file? Thank you in advance for your response.
>
> Regards,
>
> Samad
>
>
>       ____________________________________________________________________________________
> Be a better friend, newshound, and 
> know-it-all with Yahoo! Mobile.  Try it now.  http://mobile.yahoo.com/;_ylt=Ahu06i62sR8HDtDypao8Wcj9tAcJ
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
>   


-- 
-----------------------------------------------
Erik Marklund, PhD student
Laboratory of Molecular Biophysics,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,    75124 Uppsala, Sweden
phone:    +46 18 471 4537        fax: +46 18 511 755
erikm at xray.bmc.uu.se    http://xray.bmc.uu.se/molbiophys




More information about the gromacs.org_gmx-users mailing list