[gmx-users] Re: gmx-users Digest, Vol 48, Issue 97

Jian Zou jianzou at gmail.com
Mon Apr 28 05:18:44 CEST 2008


Though it is trivial, did you check if mpich/lam/openmpi is compiled
by icc and icc in PATH is the one you want?

Did you try icc9 and fftw3 and get the same error?


Regards,

Jian

>  Message: 7
>  Date: Mon, 28 Apr 2008 12:24:04 +1000
>  From: Mark Abraham <Mark.Abraham at anu.edu.au>
>  Subject: Re: [gmx-users] Need help with installation on Itanium2
>  To: Discussion list for GROMACS users <gmx-users at gromacs.org>
>  Message-ID: <48153544.2040007 at anu.edu.au>
>  Content-Type: text/plain; charset=ISO-8859-1; format=flowed
>
>
>  I get the same issue with GROMACS 3.3.2 and 3.3.3 on my Itanium2 system
>  using Intel 10.1 icc, and I also get them even without --enable-mpi, e.g.
>
>  ../configure --program-suffix=_3.3.3_single --with-fft=fftw2
>  --with-external-blas --with-external-lapack
>  LIBS="-L/opt/fftw-2.1.5/intel-9.1/lib -lscs"
>
>  then make gives
>
>  /bin/sh ../../../../libtool   --mode=compile icc -DHAVE_CONFIG_H -I.
>  -I../../../../src
>  -I../../../../../src/gmxlib/nonbonded/nb_kernel_ia64_single
>  -I../../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"
>  -O3 -w -funroll-all-loops -MT nb_kernel010_ia64_single.lo -MD -MP -MF
>  .deps/nb_kernel010_ia64_single.Tpo -c -o nb_kernel010_ia64_single.lo
>  ../../../../../src/gmxlib/nonbonded/nb_kernel_ia64_single/nb_kernel010_ia64_single.S
>   icc -DHAVE_CONFIG_H -I. -I../../../../src
>  -I../../../../../src/gmxlib/nonbonded/nb_kernel_ia64_single
>  -I../../../../../include -DGMXLIBDIR=\"/usr/local/gromacs/share/top\"
>  -O3 -w -funroll-all-loops -MT nb_kernel010_ia64_single.lo -MD -MP -MF
>  .deps/nb_kernel010_ia64_single.Tpo -c
>  ../../../../../src/gmxlib/nonbonded/nb_kernel_ia64_single/nb_kernel010_ia64_single.S
>  -o nb_kernel010_ia64_single.o
>  /tmp/iccEJOKXd.s(1) : error A2040: Unexpected token: Unary Diez Operator
>  at: Start
>  ...etc
>
>  Running the above icc by hand with -O0 also fails in the same way.
>
>  Mark
>
>



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