[gmx-users] G_RMS for different simulations

[Ricardo Soares]

Hi everyone,

I need to compare a traj.xtc file from a simulation (say, A), with a 
starting structure from *another* simulation (say, B). The protein is 
the same, but the temperatures aren't.

I tried the fallowing, with no success:

g_rms -s simulation*A*.tpr -f simulation*B*.xtc

Any ideas?

Thanks!

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Ricardo Oliveira dos Santos Soares
Post-graduation Student in Biological Physics
University of Sao Paulo - USP
Faculty of Farmaceutical Sciences of Ribeirao Preto - FCFRP
Phone: 55 (16) 3602-4840
Curriculum Lattes - http://lattes.cnpq.br/0777038258459931
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