[gmx-users] tfe

[Justin A. Lemkul]

shahrbanoo karbalaee wrote:
> Dear justin
> I trap in local minma.I dont know.

I don't know either.  Do you think there is some problem with your minimization? 
  What happened when you minimized your structure?

> Now after edit topolgy file I get error again.not found C type.I make
> tfe.pdb and tfe.gro   in prodrg and try it again editconf  for change
> pdb to gro file. I saw source code toputil line 61.not found C type.

I thought the changes I previously suggested fixed the error.  If the error is 
re-appearing then you've mangled the topology again.  Without seeing the 
contents of the .top, there is no possible way anyone can suggest to you what 
the solution to the error is.

Again, as is always recommended, please do your best to use clear English, and 
*always* quote error messages, along with the *exact* commands that you issued. 
  This type of presentation is far more clear than what you have presented here.

-Justin

> 
> best--
> sh-karbalaee
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-- 
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Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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