[gmx-users] pdb file ???
chihying2008 at gmail.com
Thu Aug 21 08:20:40 CEST 2008
It is the water-molecule system.
For a molecule, like R-N(CH3)3-Br, I could make a pdb file either
include Br ion or exclude Br ion.
If I exclude Br ion, I have to make Br ion as the counter ion for my system.
If I include Br ion, I do NOT have to make Br ion as the counter ion
since it will automatically become the counter ion.
Am I right?
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