[gmx-users] What water topology is worth using?

DimitryASuplatov genesup at gmail.com
Wed Dec 17 21:49:06 CET 2008


Thank you for answering.
One more question. As I learned spc is for use with GROMOS and tip3p - with OPLS AA. I use OPLS AA. Should I consider using tip3p or it does not really matter?
Thank you.

On Wed, 2008-12-17 at 19:41 +0100, Xavier Periole wrote:
> On Wed, 17 Dec 2008 20:55:28 +0300
>   DimitryASuplatov <genesup at gmail.com> wrote:
> > Hello,
> > 
> > what solvent topology do you use in your simulations? I`ve always used
> > spc and had no problems with it. Though recently I`ve heard that tip3p
> > is better. What do you suggest? What do you use?
> Don't worry this comment was probably based on personal/dogmatic believe
> and not on actual data. TIP3p and SPC are pretty much of same quality.
> 
> SPC/E is probably better though.
> > Thanks
> > SDA
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> -----------------------------------------------------
> XAvier Periole - PhD
> 
> - Molecular Dynamics Group -
> Computation and NMR
> University of Groningen
> The Netherlands
> -----------------------------------------------------
> 




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