[gmx-users] adding a polar Hydrogen atom to pdb file

kinshuk at chem.iitb.ac.in kinshuk at chem.iitb.ac.in
Tue Feb 12 14:14:35 CET 2008

Hi all,
i have to edit a pdb file that will have all polar hydrogens & non polar
hydrogens.while dealing with pdb2gmx commands it only adds polar hydrogens
not non polar hydrogens.So how to get the pdb files having polar as well
as non polar atoms in a pdb files.

 i will be thankful for any positive response.

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