[gmx-users] Lennard Jones spheres

Mark Abraham Mark.Abraham at anu.edu.au
Tue Feb 19 01:12:04 CET 2008

Chiara Parravicini wrote:
> Hi gromacs users,
> I would like to add LJ spheres into the protein cavitities, but I don't 
> know how to define input parameters and files to set the run. Should I 
> define spheres as "dummy atoms"? Any suggestion will be greatly appreciated!

How do you want these spheres to interact with the system?


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