[gmx-users] Problem regarding tc_grps

[Justin A. Lemkul]

Quoting sudheer babu <sudheer.pbm07 at gmail.com>:

> Dear gmx-users,
> I am working on membrane proteins, I have done position restrain step
> successfully but, I have doubt about that tc_grps how to use? I have
> searched in gmx-archives regrading this problem , but I found controversial
> answers like 1.tc_grps  - protein   sol  Cl
>                                                                      2.
> tc_grps  - protein   sol_Cl
>                                                                      3.
> tc_grps  - protein    Non-protein

And, from the archives, you have undoubtedly seen many responses about which to
use.  Also have a look at:

http://wiki.gromacs.org/index.php/Thermostats

-Justin

> Thanks in advance.
>



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Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul at vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/

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