[gmx-users] Can GROMACS mutate a residue?

[Justin A. Lemkul]

Lee Soin wrote:
> Hi!
> Is there a command in GROMACS that can substitute the atoms of a whole 
> residue for another? This is quite useful in doing mutation simulations. 
> Or if that's not possible, how should I mutate a residue? Thanks!

I would use a program like DeepView (Swiss-PDBViewer), or maybe Modeller.

-Justin

> 
> -- 
> Sun Li
> Department of Physics
> Nanjing University, China
> 
> 
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-- 
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Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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