[gmx-users] Simulation of silicon oxide surfaces
diego.enry at gmail.com
Fri Jul 18 22:13:22 CEST 2008
Hi Michael, look for the bionano tutorial at VMD site. It will
instruct you how to use TCL to build your SiO surface from an "unit
In a near future they will release the "inorganic builder plugin" that
will make things a LOT easier.
have fun !
On Tue, Jul 15, 2008 at 9:37 AM, Michael Hirtz <hirtz at uni-muenster.de> wrote:
> I want to set up a silicon oxide surface with varying -OH surface group for my
> simulation. Does anybody know a tool that could do that or maybe even has a
> topology I could start on and alter manually?
> Thanks for any sugesstions,
> gmx-users mailing list gmx-users at gromacs.org
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
Diego Enry B. Gomes
Laboratório de Modelagem e Dinamica Molecular
Universidade Federal do Rio de Janeiro - Brasil.
More information about the gromacs.org_gmx-users