sudheer.pbm07 at gmail.com
Mon Jul 28 12:36:45 CEST 2008
I would like to calculate B-factor of protein, so I performed command
g_rmsf -f .xtc -s .tpr -res -o fluctuate.xvg -od devi.xvg it has run
without error.Now i am bit doubting that which .xvg file have to take for
plot B-factor values?
B-factor is nothing but thermal devation of atoms. I think, I should take
dev.xvg for plotting B-factor values, if it is coorect, then what' s the
need for producing fluctuate.xvg? may be this is trivial question.
Could anyone help me pls.
Thanks alot in advance
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