[gmx-users] Tee-rex compilation error

Justin A. Lemkul jalemkul at vt.edu
Fri Jun 6 17:21:21 CEST 2008

Ramon Crehuet wrote:
> Dear gromacs users,
> I have installed and compiled gromacs-3.3.3 without problems. Now I have
> installed the tee-rex patch. When I compile I get the following error:
>  cc -DHAVE_CONFIG_H -I. -I. -I../../src -I../../include
> -DGMXLIBDIR=\"/usr/local/gromacs/share/top\" -O3 -fomit-frame-pointer
> -finline-functions -Wall -Wno-unused -funroll-all-loops -MT sim_util.lo
> -MD -MP -MF .deps/sim_util.Tpo -c sim_util.c -o sim_util.o
> sim_util.c: In function 'init_md':
> sim_util.c:849: warning: passing argument 5 of 'init_vcm' makes pointer
> from integer without a cast
> sim_util.c:849: error: too many arguments to function 'init_vcm'
> make[3]: *** [sim_util.lo] Error 1
> make[3]: Leaving directory `/root/gromacs-3.3.3/src/mdlib'
> make[2]: *** [all-recursive] Error 1
> make[2]: Leaving directory `/root/gromacs-3.3.3/src'
> make[1]: *** [all] Error 2
> make[1]: Leaving directory `/root/gromacs-3.3.3/src'
> make: *** [all-recursive] Error 1
> When I compile with --enable-mpi using lam 7.1.2 I get the same error.
> My compiler is gcc-4.1.2 in an opensuse 10.3
I don't know about this specific error, but using gcc-4.1.2 is asking 
for trouble.  There are numerous reports in the list archive about 
Gromacs packages that have been compiled with this gcc version leading 
to broken executables.  Both gcc-3.3 and gcc-4.0.1 have worked alright 
for me (in terms of installing Gromacs and getting a functional 


> Any ideas on how to solve this?
> Thanks in advance,
> Ramon
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Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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