回复： Re: 回复： Re: [gmx-users] 2D projection and corresponding conformation

[xi zhao]

Dear sir:
  For example, I only simulated a protein, further,
  1. using g_covar producing eigenvalue.xvg and eigenvec.trr for all  Ca atoms 
   2 using g_anaeig producing  2d projection.xvg 
  3 how to obtain corresponding corformation in 2d projection using trjconv?
  these steps are normal, can you give me some advise! ?
  Thank you very much! 

Mark Abraham <Mark.Abraham at anu.edu.au> 写道：
  xi zhao wrote:
> Dear sir :
> I also know these,but can you give some detail procedure for obtaining 
> the corresponding conformations? Thank you in advance!

No, because you've told us no detail of your procedure to generate your
eigensystem and to produce the (labeled) projected points. Once you've
got that, it's probably just a matter of applying trjconv thoughtfully.

Mark
_______________________________________________
gmx-users mailing list gmx-users at gromacs.org
http://www.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the 
www interface or send it to gmx-users-request at gromacs.org.
Can't post? Read http://www.gromacs.org/mailing_lists/users.php





       
---------------------------------
 雅虎邮箱，您的终生邮箱！
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20080612/5af08ec4/attachment.html>