[gmx-users] Frames problem
Mark.Abraham at anu.edu.au
Mon Jun 16 08:53:47 CEST 2008
s lal badshah wrote:
> Hi All,
> I have MD simulation which crashed and I combine the frames with
> trjconv. Now the problem is that when I do analysis like that of Solvent
> accessible surface area, it showed that the incomplete frame . I use the
> gmxcheck with the following result
> d 1: 'Protein'
> 1695 out of 2854 atoms were classified as hydrophobic
> Reading frame 20 time 400.000
> WARNING: Incomplete frame: nr 28 time 560
Well, that probably means what it says. Go back and check whether the
inputs to trjconv were broken, and what the output from trjconv said.
More information about the gromacs.org_gmx-users