[gmx-users] Simulate the organic molecule => input / output error

[Chih-Ying Lin]

Hi
Does the Gromacs only recognize the residues in the
pdb file?
If they are not the standard amino acids in the library, Gromacs can't
read, right???

Or, how does the Gromacs simulate the organic molecule?
The command pdb2gmx could not produce the top and the gro file.
Instead, it shows that   " File input/output error:   "


Thanks
Lin