[gmx-users] Header present but cannot be compiled

DimitryASuplatov genesup at gmail.com
Tue Nov 4 10:46:51 CET 2008


Hello,
I compile gromacs-4 on opensuse 11 2.6.25.5-1.1-default for
core2quadro with intel cc version 10.1.
Configure script threws the following warnings:

checking rpc/rpc.h usability... no
checking rpc/rpc.h presence... yes
configure: WARNING: rpc/rpc.h: present but cannot be compiled
configure: WARNING: rpc/rpc.h:     check for missing prerequisite headers?
configure: WARNING: rpc/rpc.h: see the Autoconf documentation
configure: WARNING: rpc/rpc.h:     section "Present But Cannot Be Compiled"
configure: WARNING: rpc/rpc.h: proceeding with the preprocessor's result
configure: WARNING: rpc/rpc.h: in the future, the compiler will take precedence
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to gmx-users at gromacs.org ##
configure: WARNING:     ## ------------------------------------ ##
checking for rpc/rpc.h... yes

and

checking limits.h usability... no
checking limits.h presence... yes
configure: WARNING: limits.h: present but cannot be compiled
configure: WARNING: limits.h:     check for missing prerequisite headers?
configure: WARNING: limits.h: see the Autoconf documentation
configure: WARNING: limits.h:     section "Present But Cannot Be Compiled"
configure: WARNING: limits.h: proceeding with the preprocessor's result
configure: WARNING: limits.h: in the future, the compiler will take precedence
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to gmx-users at gromacs.org ##
configure: WARNING:     ## ------------------------------------ ##
checking for limits.h... yes


The autoconf site says that this is a problem of calling a
preprocessor instead of compiler. I use default cpp for preprocessor.

Has anybody ever solved this problem?

Thanks



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