[gmx-users] how to carry out the NEMD with gromacs to compute the shear viscosity

Mark Abraham Mark.Abraham at anu.edu.au
Wed Nov 5 08:50:34 CET 2008


Jinyao Wang wrote:
> gmx-users,
>   I am a new gromacs user.
> 	I am goning to compute the shear viscosity. I have read the gromacs user manual. I have known I may carry out a NEMD to compute the shear viscosity. But I don't known how to carry out the NEMD with gromacs. If you could give me some advice about NEMD, I will appreciate it.

This question is a bit too general. Start with a Google search, read
some papers, look for a tutorial, ask a focussed question.

Mark



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