[gmx-users] Gromacs 4 Scaling Benchmarks...

Mark Abraham Mark.Abraham at anu.edu.au
Tue Nov 11 15:07:01 CET 2008

vivek sharma wrote:
> Hi All,
> one thing I forgot to mention I am getting here around 6 ns/day...for a 
> protein of size around 2600 atoms..

Much more relevant is how much water...

You can also be rate limited by I/O if you have poor hardware and/or are 
writing to disk excessively.


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