[gmx-users] trjconv write frames to separate files

tatsiana kirys tnushki at gmail.com
Wed Nov 12 17:39:18 CET 2008


i'm trying to write each frame from the bebining time=0.0 to the end
time=6000 to a separate file, but it writes only the 1frame at time 0.0:

trjconv -f 1ktz_p1_em.gro -s 1ktz_p1_em.tpr -o 1ktz_0.pdb -b 0.0 -e 6000.0

Reading frames from gro file 'GROningen MAchine for Chemical Simulation',
1148 atoms.
Reading frame       0 time    0.000
Precision of 1ktz_p1_em.gro is 0.001 (nm)
Last frame          0 time    0.000

i guess i should provide index.ndx of frames.ndx.
i havn't found anithing about what to write in these files and in what

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