[gmx-users] Re: Protein coming out of the box

sudheer babu sudheer.pbm07 at gmail.com
Sat Oct 11 13:16:19 CEST 2008

Oh...Similar type of problem once I have got, so got reply from some
one in archives that if use comm_grps= protein , protein will not come
out of the water box.So thats why I have suggested, If I say wrong
answer regret for that

>*  Hi,
*>*  Ravi
*>*  Use comm_grps = protein in your .mdp file.
*>*       3. protein coming out of the box (ravi sharma)

You will ruin energy conservation...

*>*     Hello everyone
*>*     my protein coming out of the box in final md how can i fix my
*>*     protein in the middle of the box. can you help me out??
*>* *
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