[gmx-users] two pdb files

Justin A. Lemkul jalemkul at vt.edu
Wed Oct 15 13:50:56 CEST 2008

Vitaly Chaban wrote:
> Hi,
> I have two pdb files of two equal boxes (with different particles in
> them). I want just to concatenate them. I cannot do it with genbox
> because it inserts only a part of one box into another. But the boxes
> are absolutely equal. Thus, I need to insert box 'I' into box 'II'.
> The boxes are made in such a way that the molecules don't intersect
> after insertion.
> Does anybody know how to do it?

cat pdb1.pdb pdb2.pdb > pdb_both.pdb


> Or the same with .gro files?
> Thanks.
> Vitaly
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Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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