[gmx-users] g_bond No distribution... error
A.Rzepiela
A.Rzepiela at rug.nl
Tue Oct 21 18:44:46 CEST 2008
Dear Users
In the gmx_bond.c maximal distance ( 2 A ) between two bonded atoms is
hardcoded ( lines 137: 141)
if (blen == -1) {
b0 = 0;
b1 = 0.2;
db = (b1-b0)/MAXTAB;
}
so if one wants to compute distribution for CG molecule, program
crashes with error:
Fatal error:
No distribution... (i0 = 999, i1 = 1)? ? ! ! ? !
The work-around is to use option -blen and -tol, and give average,
that is computed correctly and displayed before the crash (or increase
this value).
The final values of distribution are multiplyed by 5000 (1/db) on line
204. Why ?
Greetings
Andrzej Rzepiela
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