[gmx-users] How to make a pdb file for methane pair?

[xianghong qi]

Thanks, so how to edit  a residue name ? I am confused.  sorry about such
simple question.
-Xianghong Qi

On Tue, Oct 21, 2008 at 9:01 PM, Mark Abraham <Mark.Abraham at anu.edu.au>wrote:

> xianghong qi wrote:
>
>> Hello, everyone,
>> I want to create a pdb file for methane pair . I can make methane pair
>> from MOE and then save to pdb file format without any residue name there.
>> The question is that I can't convert pdb file to .gro file from gromacs
>> without residue name.  Anyone has any idea about this question. I appreciate
>> your help.
>>
>
> You don't need a .gro file for itself.. see
> http://wiki.gromacs.org/index.php/Coordinate_File#On_the_need_for_a_.gro_file
>
> You'll need a residue name to get a topology defined, so edit one in.
>
> Mark
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the www interface
> or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
>



-- 
Some people make the world more special just by being in it.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20081022/db11a6b0/attachment.html>