[gmx-users] how to set up a rigid system

[Justin A. Lemkul]

Jinyao Wang wrote:
> Dear GMX users,
> 
> I am carrying out MD for a rigid system by Gromacs.But I couldnot know how to set up this rigid system.
> If you could give me some advice or some material, I will appreciate it.
> 	
> 

You might try reading in the manual about restraints (position, distance, 
dihedral) and/or freezegrps (.mdp option).  Without a better description of your 
system, there's not much else I can guess that would help you.

-Justin

> 　　　　　　　　
>  				
> 
> 　　　　　　　　Jinyao Wang
> 　　　　　　　　wangjy at ciac.jl.cn
> 　　　　　　　　　　2008-10-28
> 
> 
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-- 
========================================

Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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