[gmx-users] Gromacs 4.0 installation problem

Justin A. Lemkul jalemkul at vt.edu
Thu Oct 30 02:01:24 CET 2008



Chavatte Philippe wrote:

<snip>

> /usr/bin/ld: cannot find -lX11

You don't have X11 installed, probably because you don't need it on a cluster. 
You can configure --without-x to remove the X11 dependency.

-Justin

> 
> collect2: ld returned 1 exit status
> 
> make[3]: *** [grompp] Erreur 1
> 
> make[3]: quittant le répertoire «
> /data1/soft/linux/gromacs-4.0s/src/kernel »
> 
> make[2]: *** [all-recursive] Erreur 1
> 
> make[2]: quittant le répertoire « /data1/soft/linux/gromacs-4.0s/src »
> 
> make[1]: *** [all] Erreur 2
> 
> make[1]: quittant le répertoire « /data1/soft/linux/gromacs-4.0s/src »
> 
> make: *** [all-recursive] Erreur 1
> 
> 
> 
> We have compiled gromacs 4.0 on a workstation under RHEL4 without problem.
> 
> 
> 
> Thank you for your help.
> 
> 
> 
> P. CHAVATTE
> 
> 
> 
> -----------------
> 
> 
> 
> Professeur Philippe CHAVATTE
> 
> Université Lille 2
> 
> Faculté des Sciences Pharmaceutiques et Biologiques
> 
> Laboratoire de Chimie Thérapeutique - EA1043
> 
> BP 83
> 
> 59006 LILLE CEDEX
> 
> FRANCE
> 
> 
> 
> E-Mail : philippe.chavatte at univ-lille2.fr
> 
> 

-- 
========================================

Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

========================================



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