[gmx-users] WARNING 1 [file aminoacids.dat, line 1]

Justin A. Lemkul jalemkul at vt.edu
Thu Oct 30 22:21:13 CET 2008

Chih-Ying Lin wrote:
> Hi
> My system did not include protein.
> When I run grompp to add water, it showed the warning.

I'm not sure what you're doing...using grompp or genbox, since grompp does not 
add water.  Can you show us your command line?

> WARNING 1 [file aminoacids.dat, line 1]

Is this the only output?  What is the whole output of the command?


> Could I just negect the warning since no protein in my system?
> Thank you
> Lin
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Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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