[gmx-users] Bonds missing in VMD visualization

[Andreas Kring]

Hello,

I have run an MD simulation of 1000 1,1,1-trichloroethane molecules and 
it all worked nicely. But when I try to visualize the trajectory file in 
VMD some of the C-Cl bonds are missing (although all the atoms appear on 
the screen - only bonds are missing)?

Can I do anything to fix this?

/Andreas