[gmx-users] Parameters for DNA bases

Jeff Woodford jwoodfor at eou.edu
Tue Sep 2 23:33:21 CEST 2008

Hi all,

Forgive me if this is a stupid question, but:

I am attempting to simulate the interaction between a peptide and a DNA
strand using the OPLS/AA force field.  However the parameters for the DNA
bases don't appear to be included.  Where might I find these parameters
suitable for adapting to GROMACS?


Thanks in advance,



Jeffrey N. Woodford

Associate Professor of Chemistry

Eastern Oregon University

Tel: 541-962-3321

Fax: 541-962-3873


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20080902/e4f6fccd/attachment.html>

More information about the gromacs.org_gmx-users mailing list