[gmx-users] g_energy

ravi sharma rdsharma_4u at yahoo.com
Sat Sep 6 16:56:12 CEST 2008

RMSD is your just deviation of backbone from native stare while RMS fluctuation shows the 
per atom deviation throughout simulation.


Ravi Datta Sharma  Lecturer,  Bioinformatics,
Department of Microbiology,
CCS Unversity,

--- On Sat, 6/9/08, Alessandro.Maiorana at roma2.infn.it <Alessandro.Maiorana at roma2.infn.it> wrote:
From: Alessandro.Maiorana at roma2.infn.it <Alessandro.Maiorana at roma2.infn.it>
Subject: [gmx-users] g_energy
To: gmx-users at gromacs.org
Date: Saturday, 6 September, 2008, 2:41 PM


how does it count the drift in g_energy? What is the equation? What is the
difference among fluct. and RMSD? Thanks, see you soon.
gmx-users mailing list    gmx-users at gromacs.org
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to gmx-users-request at gromacs.org.
Can't post? Read http://www.gromacs.org/mailing_lists/users.php

      Unlimited freedom, unlimited storage. Get it now, on http://help.yahoo.com/l/in/yahoo/mail/yahoomail/tools/tools-08.html/
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20080906/812a563c/attachment.html>

More information about the gromacs.org_gmx-users mailing list