[gmx-users] installation problem: undefined symbols: _gmx_fft_(init_)3d_real

Ervasti, H. (Henri) Henri.Ervasti at dstioffice.nl
Mon Sep 8 16:34:14 CEST 2008

Dear all,


I would like to ask you help on an installation issue of GROMACS. When I
am running ''make'' after configuring GROMACS, I get the following

/usr/libexec/gcc/i686-apple-darwin8/4.2.1/ld: undefined symbols: 



Collect2: ld returned 1 exit status

Make[3]: *** [mdrun] Error 1

Make[2]: *** [all-recursive] Error 1

Make[1]: *** [all] Error 2

Make: *** [all-recursive] Error 1


This clearly relates to the FFTW program I have already successfully
installed, but I don't see why this happens. Has anyone else confronted
this problem and solved it? I would appreciate any help! As additional
info, I use Intel Mac Core Duo machine and I have gcc 4.2 installed with
the XCode tools 2.5.



Henri Ervasti


Dr. Henri K. Ervasti

Dutch Separation Technology Institute (DSTI)

Stationsstraat 77, 3811 MH Amersfoort

The Netherlands

tel. +31 33 467 6241

mob. +31 6 2625 4987

e-mail Henri.Ervasti at dsti.nl




-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20080908/b190a584/attachment.html>

More information about the gromacs.org_gmx-users mailing list