[gmx-users] simulation using POPC lipid bilayer

[Justin A. Lemkul]

prasun kumar wrote:
> Dear users,
> 
> I am trying to do lipid protein simulation using POPC.
> while running GROMPP command I am getting error
> 
> Atom LC3 not found
> 
> I changed POPC to POP and again ran GROMPP ,but the error is same.
> 
> what should I do .
> 

Then you haven't properly added the parameters from lipid.itp to the *nb.itp 
file for the force field you're using.

-Justin

> Thanx in advance
> 
> -- 
> PRASUN (ASHOKA)
> 
> 
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-- 
========================================

Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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