[gmx-users] Re: Segmentation fault in Gromacs 4.0 beta1
xianghong001 at gmail.com
Tue Sep 16 22:28:56 CEST 2008
Thanks for your response.
I followed the instruction in CVS. my architecture is x86-64, and compiler
is gcc. thanks.
I will try 3.3.3
On Tue, Sep 16, 2008 at 4:02 PM, Justin A. Lemkul <jalemkul at vt.edu> wrote:
> xianghong qi wrote:
>> Hi, everyone:
>> I am a beginner for Gromacs. I am using the latest version Gromacs 4.0
>> beta1. Then I follow the tutorial part: Introduction to MD <
>> http://md.chem.rug.nl/education/mdcourse/> by the Groningen group.
>> Compiling is ok, but I always get the Segmentation fault when I use command
>> : genbox -cp minimized_box.gro -cs spc216.gro -o minimized_water.gro -p
>> aki.top. Also I get the same problem when i try other exercises. Does
>> anyone has same problem like me ? or can anyone
>> give me a hint for that? Thanks in advance.
> It sounds like your installation is faulty. What architecture are you
> running on? What compilers did you use?
> If you are just starting out, it is probably better to use an official
> release of Gromacs (the latest being 3.3.3), since 4.0beta1 is still in
>> -Xianghong Qi
>> Postdoctoral Associate
>> Department of Chemistry
>> University of Pittsburgh
>> Chevron Science Center
>> 219 Parkman Avenue
>> Pittsburgh, PA 15260
>> Office: 338 EBERLY
>> Phone: 412-383-5400
>> Some people make the world more special just by being in it.
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> Justin A. Lemkul
> Graduate Research Assistant
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> gmx-users mailing list gmx-users at gromacs.org
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the www interface
> or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
Department of Chemistry
University of Pittsburgh
Chevron Science Center
219 Parkman Avenue
Pittsburgh, PA 15260
Office: 338 EBERLY
Some people make the world more special just by being in it.
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