[gmx-users] Re: Segmentation fault in Gromacs 4.0 beta1

[xianghong qi]

Thanks for your response.
I followed the instruction in CVS. my architecture is x86-64, and compiler
is gcc.  thanks.
I will try 3.3.3
-Xianghong Qi

On Tue, Sep 16, 2008 at 4:02 PM, Justin A. Lemkul <jalemkul at vt.edu> wrote:

>
>
> xianghong qi wrote:
>
>> Hi, everyone:
>>
>> I am a beginner for Gromacs. I am using the latest version  Gromacs 4.0
>> beta1. Then I follow the tutorial part: Introduction to MD <
>> http://md.chem.rug.nl/education/mdcourse/> by the Groningen group.
>> Compiling is ok, but I always get the Segmentation fault when I use command
>> : genbox -cp minimized_box.gro -cs spc216.gro -o minimized_water.gro -p
>> aki.top. Also I get the same problem when i try other exercises.  Does
>> anyone has same problem like me ? or can anyone
>> give me a hint for that?  Thanks in advance.
>>
>
> It sounds like your installation is faulty.  What architecture are you
> running on?  What compilers did you use?
>
> If you are just starting out, it is probably better to use an official
> release of Gromacs (the latest being 3.3.3), since 4.0beta1 is still in
> development.
>
> -Justin
>
>
>> -Xianghong Qi
>>
>> --
>> Postdoctoral Associate
>> Department of Chemistry
>> University of Pittsburgh
>> Chevron Science Center
>> 219 Parkman Avenue
>> Pittsburgh, PA 15260
>> Office: 338 EBERLY
>> Phone: 412-383-5400
>>
>>
>> Some people make the world more special just by being in it.
>>
>>
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>
> --
> ========================================
>
> Justin A. Lemkul
> Graduate Research Assistant
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
>
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-- 
Postdoctoral Associate
Department of Chemistry
University of Pittsburgh
Chevron Science Center
219 Parkman Avenue
Pittsburgh, PA 15260
Office: 338 EBERLY
Phone: 412-383-5400


Some people make the world more special just by being in it.
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